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#diversification

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No evidence of transposable element bursts in the Galápagos Scalesia adaptive radiation despite hybridization, diversification and ecological niche shifts.

#Transposons #TEburst #AdaptiveRadiation #Diversification #Hybridization #Scalesia #PlantScience

mobilednajournal.biomedcentral

BioMed CentralNo evidence of transposable element bursts in the Galápagos Scalesia adaptive radiation despite hybridization, diversification and ecological niche shifts - Mobile DNATransposable elements (TEs) have been hypothesized to play a pivotal role in driving diversification by facilitating the emergence of novel phenotypes and the accumulation of divergence between species. Hybridization and adaptation to novel niches have been proposed to destabilize mechanisms constraining TE proliferation, potentially inducing a ‘TE burst’ that promotes TE accumulation on the genome. The rapid speciation and ecological diversification characteristic of adaptive radiations offer a unique opportunity to examine the link between TE accumulation and speciation, diversification, hybridization and adaptation. Here, focusing on all 15 species of the genus Scalesia (Asteraceae), a radiation endemic to the Galápagos Islands, we test whether diversification, hybridization, or shifts in ecological niche are associated with changes in TE accumulation in genomes. Our analyses reveal little to no variation in TE accumulation among Scalesia species nor its hybrid populations. Shifts in ecological niches, linked to climatic variation, did not result in discernible changes in TE accumulation, a surprising finding given the anticipated selective pressure imposed by aridity, a factor often linked to genome size reduction. We found no distinct patterns in the temporal accumulation of TEs, and no effects at the class or superfamily level. Our findings suggest that while TEs may play a key role in evolution at the locus level, their macroevolutionary association with diversification or speciation appears weak. Rather than actively driving evolutionary diversification, TEs may simply be'along for the ride.

#Nvidia is seeking to reduce its reliance on #BigTech companies by striking new partnerships to sell its artificial intelligence chips to nation states, corporate groups and challengers to groups such as #Microsoft, #Amazon and #Google.

This week, the #American chip giant announced a multibillion-dollar US chip deal with #SaudiArabia’s #Humain, while the #UnitedArabEmirates announced plans to build one of the world’s largest #DataCentres in co-ordination with the US government, as the #GulfStates plan to build massive #AI infrastructure.”

#ArtificialIntelligence / #silicon / #SiliconChips / #AIChips / #diversification <archive.md/NHg7O> / <ft.com/content/2ba1d064-242d-4> (paywall)

"It's so critical that Alberta start to look towards strategies for economic #diversification but right now what we're seeing under this government is just blind support for #FossilFuels no matter what that costs & no matter how vulnerable it leaves the province."

PODCAST podcastics.com/episode/347812/

Kennt Ihr den #VivaldiBrowser @Vivaldi? In Anbetracht der weltpolitischen Lage, habe ich beschlossen, den als Standardbrowser festzulegen. Das ist eine der wenigen Browser-Alternativen, die nicht aus den #USA stammen, sondern aus Norwegen & damit hoffentlich weitgehend unabhängig von #Trump|s Einfluss ist. Der bringt Ende-zu-Ende-verschlüsselte Synchronisation, sowie Ad-/Trackingblocker serienmäßig (auch auf iOS)!
vivaldi.com/de/
#Vivaldi #Browser #diversification

Vivaldi BrowserVivaldi Browser | Leistungsstarker, persönlicher und privater Webbrowser
More from Team Vivaldi

#SARS-CoV-2 within-host population #expansion, #diversification and #adaptation in #zoo #tigers, #lions and #hyenas

Source: BioRxIV, AbstractSARS-CoV-2 rapidly adapts to new hosts following cross-species transmission; this is highly relevant as novel within-host variants have emerged following infection of susceptible wild and domestic animal species. Furthermore, SARS-CoV-2 transmission from animals (e.g., white-tailed deer, mink, domestic cats, and others) back to…

etidioh.wordpress.com/2024/10/

ETIDIoH · #SARS-CoV-2 within-host population #expansion, #diversification and #adaptation in #zoo #tigers, #lions and #hyenasSource: BioRxIV, AbstractSARS-CoV-2 rapidly adapts to new hosts following cross-species transmission; this is highly relevant as novel within-host variants have emerged following infection of susce…

AlphaFold2 Reveals Structural #Patterns of Seasonal #Haplotype #Diversification in #SARS-CoV-2 #Nucleocapsid Protein #Variants mdpi.com/1999-4915/16/9/1358

Our strategy of mapping the dynamic evolutionary landscape of genetically linked mutations to the N-protein structure demonstrates the utility of ab initio modeling and deep learning tools for therapeutic intervention.

MDPIAlphaFold2 Reveals Structural Patterns of Seasonal Haplotype Diversification in SARS-CoV-2 Nucleocapsid Protein VariantsThe COVID-19 pandemic saw the emergence of various Variants of Concern (VOCs) that took the world by storm, often replacing the ones that preceded them. The characteristic mutant constellations of these VOCs increased viral transmissibility and infectivity. Their origin and evolution remain puzzling. With the help of data mining efforts and the GISAID database, a chronology of 22 haplotypes described viral evolution up until 23 July 2023. Since the three-dimensional atomic structures of proteins corresponding to the identified haplotypes are not available, ab initio methods were here utilized. Regions of intrinsic disorder proved to be important for viral evolution, as evidenced by the targeted change to the nucleocapsid (N) protein at the sequence, structure, and biochemical levels. The linker region of the N-protein, which binds to the RNA genome and self-oligomerizes for efficient genome packaging, was greatly impacted by mutations throughout the pandemic, followed by changes in structure and intrinsic disorder. Remarkably, VOC constellations acted co-operatively to balance the more extreme effects of individual haplotypes. Our strategy of mapping the dynamic evolutionary landscape of genetically linked mutations to the N-protein structure demonstrates the utility of ab initio modeling and deep learning tools for therapeutic intervention.

I'm seeking grad students this round of admissions: see more at brianomeara.info/opportunities .

Like other good ecology and evolutionary biology programs, students making adequate progress are fully funded (through TA lines), we practice holistic admissions, and students are in a community.

Some of the topics folks in my lab have worked on:

#Phylogenetics
#Evolution
#Conservation
#Systematics
#TraitEvolution
#Diversification
#Dating
#Fish, #Birds, #Insects, #Plants, and more

brianomeara.infoBrian O’Meara - Opportunities

While Canaan may boast about their 10X #YoY growth and their clever dual #strategy of selling miners during bull markets and self-mining in bear markets, it's worth asking: What's Plan B if both markets go south? Additionally, their global operations, though seemingly good for #diversification, could actually be a logistical nightmare waiting to happen. Before you consider investing in Canaan, it's crucial to weigh these potential risks. #Canaan #Volatility #Investing #fintoot