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#CryoEM

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Great to see Rebekka Wild's group going from strength to strength.

Structural basis for human chondroitin sulfate chain polymerization | bioRxiv

#StructuralBiology #CryoEM #Glycotime
#Science #Research

biorxiv.org/content/10.1101/20

bioRxiv · Structural basis for human chondroitin sulfate chain polymerizationChondroitin sulfates are complex polysaccharide chains that regulate various biological processes at the cell surface and within the extracellular matrix. Here, we identify four heterodimeric complexes responsible for chondroitin sulfate chain polymerization in humans: CHSY1-CHPF, CHSY1-CHPF2, CHSY3-CHPF and CHSY3-CHPF2. Using a novel in vitro glycosylation assay based on chemo-enzymatically synthesized fluorescent substrates, we demonstrate that all four complexes exhibit chain polymerization activity. The cryo-EM structure of the CHSY3-CHPF complex provides, for the first time, molecular insights into the chondroitin sulfate chain polymerization reaction. The architecture of the catalytic sites suggests that CHSY1 and CHSY3 are enzymatically active, while CHPF and CHPF2 primarily play a stabilizing role. Mutational analysis of purified enzyme complexes, combined with an in cellulo complementation assay, confirms that only CHSY1 and CHSY3 have bifunctional glycosyltransferase activities. Based on the spatial arrangement of the catalytic sites, we propose that chondroitin sulfates chain polymerization follows a non-processive, disruptive mechanism. ### Competing Interest Statement The authors have declared no competing interest.

Our project for the SHADOC 🇪🇺 doctoral program has been selected. If you are interested to do an international #PhD in structural virology @afmblab.bsky.social , the #HellenicPasteurInstitute and #SynchrotronSoleil please visit our proposal : schadoc.univ-amu.fr/en/call-ca
➡️ For application procedure please read carefully : schadoc.univ-amu.fr/en/call-ca
➡️ Call for candidates are open between March 10th and april 21st.
@strucbio #StructuralBiology #virology #CryoEM #SXT

schadoc.univ-amu.frGARCOM | SCHADOC

This is pretty amazing. TMEM206 structure determined using a single HEK cell colony!

"MISO: Microfluidic protein isolation enables single particle cryo-EM structure determination from a single cell colony”

biorxiv.org/content/10.1101/20

bioRxiv · MISO: Microfluidic protein isolation enables single particle cryo-EM structure determination from a single cell colonySingle particle cryo-EM enables reconstructing near-atomic or even atomic resolution 3D maps of proteins by visualizing thousands to a few million purified protein particles embedded in nanometer-thick vitreous ice. This corresponds to picograms of purified protein, which can potentially be isolated from a few thousand cells. Hence, cryo-EM holds the potential of one of the most sensitive analytical methods that deliver a high-resolution protein structure as a readout. In practice, more than a million times more starting biological material is required to prepare cryo-EM grids. To close the gap, we developed a micro isolation (MISO) method that combines microfluidics-based protein purification with cryo-EM grid preparation. We validated the method on soluble bacterial and eukaryotic membrane proteins. We showed that MISO enables protein structure determination starting from below one microgram of a target protein and going from cells to cryo-EM grids within a few hours. This scales down the purification by a factor of a few hundred to a few thousand and opens possibilities for the structural characterization of hitherto inaccessible proteins. ### Competing Interest Statement G.E. and R.G.E are inventors on the patent application WO WO2023/232662/A1 disclosing the MISO instrument and chip design filed by VIB and VUB.

Since last month, the #wwPDB @PDBeurope considers preprints as publications that trigger release of the corresponding #PDB entries. This is great! It was always frustrating to see new preprints and have to wait for months until being able to look at maps and atomic models.
wwpdb.org/news/news?year=2024#

www.wwpdb.orgwwPDB: 2024 NewswwPDB: Worldwide Protein Data Bank